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Feature entry correction - #51

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epbrenner merged 6 commits into
mainfrom
pfam-correction
Sep 14, 2026
Merged

epbrenner merged 6 commits into
mainfrom
pfam-correction

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@AbhirupaGhosh

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Some Pfam entries had a mismatch in how they are processed. eg, Beta-lactamase and Beta.lactamase

For uniform processing, I chose to convert all - to .

While making the changes to feature_to_head.R, I also removed the now obsolete feature_to_cluster.R

@AbhirupaGhosh AbhirupaGhosh changed the title Pfam correction Feature entry correction Sep 9, 2026
AbhirupaGhosh and others added 4 commits September 9, 2026 11:43
Cleaned the NAMESPACE, re-ran devtools::document(), and added a missing string after a @return to satisfying the documentation check.
epbrenner
epbrenner previously approved these changes Sep 14, 2026

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Preparing genomes through ML modeling runs as expected with the fix. Cleaned the NAMESPACE to reflect the feature_to_cluster.R file being dropped since devtools::install(".") failed without that, but it's ready to merge!

@epbrenner
epbrenner merged commit 5ee7bdd into main Sep 14, 2026
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epbrenner deleted the pfam-correction branch September 14, 2026 16:24
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2 participants